EnhancerDB
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  3. rs534532574[chr17:2114960]
Enhancers that have rs534532574[chr17:2114960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534532574[chr17:2114960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2114952 2114962 POU6F2 JASPAR yes 52738076
chr17 2114953 2114963 ALX3 JASPAR yes 52738077
chr17 2114953 2114963 ESX1 JASPAR yes 52738078
chr17 2114953 2114963 GSX1 JASPAR yes 52738079
chr17 2114953 2114963 GSX2 JASPAR yes 52738080
chr17 2114953 2114963 HOXB2 JASPAR yes 52738081
chr17 2114953 2114963 HOXB3 JASPAR yes 52738082
chr17 2114953 2114963 LBX2 JASPAR yes 52738083
chr17 2114953 2114963 LHX2 JASPAR yes 52738084
chr17 2114953 2114963 MEOX1 JASPAR yes 52738085
chr17 2114953 2114963 MEOX2 JASPAR yes 52738086
chr17 2114953 2114963 MIXL1 JASPAR yes 52738087
chr17 2114953 2114963 MNX1 JASPAR yes 52738088
chr17 2114953 2114963 NOTO JASPAR yes 52738089
chr17 2114954 2114962 BSX JASPAR yes 52738090
chr17 2114954 2114962 DLX6 JASPAR yes 52738091
chr17 2114954 2114962 EN1 JASPAR yes 52738092
chr17 2114954 2114962 ISX JASPAR yes 52738093
chr17 2114954 2114962 LBX1 JASPAR yes 52738094
chr17 2114954 2114962 LHX9 JASPAR yes 52738095
chr17 2114954 2114962 LMX1A JASPAR yes 52738096
chr17 2114954 2114962 LMX1B JASPAR yes 52738097
chr17 2114954 2114962 NKX6-1 JASPAR yes 52738098
chr17 2114954 2114962 NKX6-2 JASPAR yes 52738099
chr17 2114954 2114962 PAX4 JASPAR yes 52738100
chr17 2114954 2114962 PDX1 JASPAR yes 52738101
chr17 2114954 2114962 PRRX1 JASPAR yes 52738102
chr17 2114954 2114962 RAX2 JASPAR yes 52738103
chr17 2114954 2114962 SHOX JASPAR yes 52738104
chr17 2114954 2114962 UNCX JASPAR yes 52738105
chr17 2114954 2114962 VAX1 JASPAR yes 52738106
chr17 2114954 2114962 VAX2 JASPAR yes 52738107
chr17 2114954 2114962 VSX1 JASPAR yes 52738108
chr17 2114954 2114962 VSX2 JASPAR yes 52738109
chr17 2114954 2114964 HOXB13 JASPAR yes 52738110
chr17 2114954 2114964 HOXD13 JASPAR yes 52738111
chr17 2114955 2114976 IRF1 JASPAR yes 52738112
chr17 2114956 2114977 IRF1 JASPAR yes 52738113
chr17 2114957 2114972 FOXP1 JASPAR yes 52738114
chr17 2114958 2114973 FOXP1 JASPAR yes 52738115
chr17 2114959 2114965 TBP TRANSFAC yes 52738116
chr17 2114959 2114974 FOXP1 JASPAR yes 52738117
chr17 2114960 2114975 FOXP1 JASPAR yes 52738118
chr17 2114960 2114981 IRF1 JASPAR yes 52738119
Genes associated with rs534532574[chr17:2114960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More