EnhancerDB
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  3. rs534550427[chr17:48960557]
Enhancers that have rs534550427[chr17:48960557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs534550427[chr17:48960557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48960125 48960655 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770131
chr17 48960128 48960778 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770132
chr17 48960153 48960669 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770133
chr17 48960216 48960726 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770134
chr17 48960356 48960632 TCF7L2 GTRD no Colon (HCT116) 21770135
chr17 48960415 48960586 ZNF143 GTRD no Epithelial (MCF-7) 21770136
chr17 48960429 48962481 ZNF274 GTRD no Liver (HepG2) 21770137
chr17 48960492 48962210 ZNF274 GTRD no Bone Marrow (K562) 21770138
chr17 48960499 48962268 ZNF274 GTRD no Liver (HepG2) 21770139
chr17 48960503 48962251 ZNF274 GTRD no Liver (HepG2) 21770140
chr17 48960511 48962419 ZNF274 GTRD no Liver (HepG2) 21770141
chr17 48960542 48961953 ZNF274 GTRD no Liver (HepG2) 21770142
Genes associated with rs534550427[chr17:48960557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More