EnhancerDB
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  3. rs534552251[chr6:108916363]
Enhancers that have rs534552251[chr6:108916363]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534552251[chr6:108916363]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108916353 108916364 DUX4 JASPAR yes 104181798
chr6 108916363 108916376 SCRT2 JASPAR yes 104181799
chr6 108916363 108916378 SCRT1 JASPAR yes 104181800
Genes associated with rs534552251[chr6:108916363], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More