EnhancerDB
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  3. rs534563712[chr1:19792639]
Enhancers that have rs534563712[chr1:19792639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534563712[chr1:19792639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19792631 19792651 RREB1 JASPAR yes 27194377
chr1 19792634 19792654 RREB1 JASPAR yes 27194378
chr1 19792634 19792655 ZNF263 JASPAR yes 27194379
chr1 19792636 19792644 TBX5 JASPAR yes 27194380
Genes associated with rs534563712[chr1:19792639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More