EnhancerDB
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  3. rs534601513[chr1:168436273]
Enhancers that have rs534601513[chr1:168436273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs534601513[chr1:168436273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168436029 168436339 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21348083
chr1 168436042 168436372 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21348084
chr1 168436086 168436341 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21348085
chr1 168436258 168436273 STAT2 JASPAR yes 32927737
chr1 168436259 168436274 FOXP1 JASPAR yes 32927739
chr1 168436260 168436281 IRF1 JASPAR yes 32927740
Genes associated with rs534601513[chr1:168436273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More