EnhancerDB
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  3. rs534632005[chr17:78629513]
Enhancers that have rs534632005[chr17:78629513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs534632005[chr17:78629513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78629508 78629523 SCRT1 JASPAR yes 56263472
chr17 78629512 78629521 SNAI2 JASPAR yes 56263473
chr17 78629512 78629522 FIGLA JASPAR yes 56263474
chr17 78629512 78629522 ID4 JASPAR yes 56263475
chr17 78629512 78629522 TCF3 JASPAR yes 56263476
chr17 78629512 78629522 TCF4 JASPAR yes 56263477
Genes associated with rs534632005[chr17:78629513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More