EnhancerDB
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  3. rs534710394[chr11:12820502]
Enhancers that have rs534710394[chr11:12820502]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534710394[chr11:12820502]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12820491 12820511 RREB1 JASPAR yes 37479029
chr11 12820494 12820514 RREB1 JASPAR yes 37479030
chr11 12820500 12820510 ZNF740 JASPAR yes 37479031
chr11 12820501 12820511 SP1 JASPAR yes 37479032
chr11 12820501 12820511 ZNF740 JASPAR yes 37479033
chr11 12820501 12820516 TFAP2C JASPAR yes 37479034
chr11 12820502 12820512 ZNF740 JASPAR yes 37479035
chr11 12820502 12820515 TFAP2A JASPAR yes 37479036
chr11 12820502 12820515 TFAP2B JASPAR yes 37479037
chr11 12820502 12820515 TFAP2C JASPAR yes 37479038
Genes associated with rs534710394[chr11:12820502], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More