EnhancerDB
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  3. rs534711752[chr16:88836949]
Enhancers that have rs534711752[chr16:88836949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534711752[chr16:88836949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88835834 88838414 POLR2A UCSC Txn Factor no Conserved 108223405
chr16 88835834 88838414 POLR2A UCSC Txn Factor no Conserved 108223406
chr16 88835834 88838414 POLR2A UCSC Txn Factor no Conserved 108223407
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 21736969
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223440
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223441
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223442
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223443
chr16 88836535 88837064 ZNF143 GTRD no Epithelial (MCF-7) 21736970
chr16 88836535 88837064 ZNF143 GTRD no Epithelial (MCF-7) 108223444
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 21736971
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223445
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223446
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223447
chr16 88836560 88843191 TCF7L2 GTRD no Colon (HCT116) 108223448
chr16 88836599 88837323 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736972
chr16 88836599 88837323 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223449
chr16 88836599 88837323 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223450
chr16 88836679 88839683 TCF7L2 GTRD no Colon (HCT116) 21736973
chr16 88836679 88839683 TCF7L2 GTRD no Colon (HCT116) 108223451
chr16 88836679 88839683 TCF7L2 GTRD no Colon (HCT116) 108223452
chr16 88836803 88837307 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736974
chr16 88836803 88837307 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223453
chr16 88836863 88837373 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736975
chr16 88836863 88837373 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223454
Genes associated with rs534711752[chr16:88836949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More