EnhancerDB
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  3. rs534721472[chr1:171403042]
Enhancers that have rs534721472[chr1:171403042]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs534721472[chr1:171403042]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171402798 171404004 ZNF143 GTRD no Epithelial (MCF-7) 21349655
chr1 171402799 171405826 ZNF143 GTRD no Epithelial (MCF-7) 21349656
chr1 171402799 171405826 ZNF143 GTRD no Epithelial (MCF-7) 107845400
chr1 171402805 171403878 ZNF143 GTRD no Epithelial (MCF-7) 21349657
chr1 171402831 171403900 ZNF143 GTRD no Epithelial (MCF-7) 21349658
chr1 171402839 171403973 ZNF143 GTRD no Epithelial (MCF-7) 21349659
chr1 171402951 171403767 ZNF143 GTRD no Epithelial (MCF-7) 21349660
chr1 171402981 171403842 ZNF143 GTRD no Epithelial (MCF-7) 21349661
chr1 171403036 171403996 ZNF274 GTRD no Cervix (HeLa-S3) 21349662
chr1 171403036 171404057 ZNF274 GTRD no Cervix (HeLa-S3) 21349663
Genes associated with rs534721472[chr1:171403042], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More