EnhancerDB
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  3. rs534777658[chr3:58040429]
Enhancers that have rs534777658[chr3:58040429]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534777658[chr3:58040429]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58040417 58040430 NR2F1 JASPAR yes 2670276
chr3 58040427 58040443 ZNF143 JASPAR yes 2670277
chr3 58040428 58040433 TFAP2A TRANSFAC yes 2670278
chr3 58040428 58040434 MZF1 JASPAR yes 2670279
chr3 58040429 58040439 GSC2 JASPAR yes 2670280
chr3 58040429 58040439 GSC JASPAR yes 2670281
Genes associated with rs534777658[chr3:58040429], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More