EnhancerDB
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  3. rs534825937[chr1:230249530]
Enhancers that have rs534825937[chr1:230249530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230249347 230250007 vista5492
VISTA
Transcript factors that have rs534825937[chr1:230249530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230249113 230249763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391454
chr1 230249113 230249763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878670
chr1 230249314 230250364 STAT3 UCSC Txn Factor no Conserved 107878671
chr1 230249319 230249823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391455
chr1 230249319 230249823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878672
chr1 230249319 230250024 TCF7L2 UCSC Txn Factor no Conserved 107878673
chr1 230249356 230249886 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391456
chr1 230249356 230249886 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878674
chr1 230249369 230249885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391457
chr1 230249369 230249885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878675
chr1 230249396 230249740 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391458
chr1 230249396 230249740 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878676
chr1 230249442 230249812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391459
chr1 230249442 230249812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878677
chr1 230249456 230249736 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21391460
chr1 230249456 230249736 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878678
chr1 230249458 230249798 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391461
chr1 230249458 230249798 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878679
chr1 230249472 230250022 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391462
chr1 230249472 230250022 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878680
chr1 230249475 230249879 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391463
chr1 230249475 230249879 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878681
chr1 230249478 230249874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391464
chr1 230249478 230249874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878682
chr1 230249478 230249892 FOS UCSC Txn Factor no Conserved 107878683
chr1 230249491 230249678 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391465
chr1 230249491 230249678 STAT1 UCSC Txn Factor no Conserved 107878684
chr1 230249491 230249678 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878685
chr1 230249512 230249842 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391466
chr1 230249512 230249842 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878686
chr1 230249517 230249530 NR2F1 JASPAR yes 36022138
chr1 230249517 230249530 NR2F1 JASPAR yes 118477627
chr1 230249517 230249837 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391467
chr1 230249517 230249837 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878687
chr1 230249520 230250024 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391468
chr1 230249520 230250024 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878688
chr1 230249525 230249829 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391469
chr1 230249525 230249829 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878689
chr1 230249528 230249788 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391470
chr1 230249528 230249788 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878690
Genes associated with rs534825937[chr1:230249530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More