EnhancerDB
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  3. rs534943449[chr1:225795217]
Enhancers that have rs534943449[chr1:225795217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs534943449[chr1:225795217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225795204 225795218 GLIS3 JASPAR yes 35754748
chr1 225795213 225795217 LFA1 TRANSFAC yes 35754750
chr1 225795215 225795230 FOXP1 JASPAR yes 35754751
chr1 225795216 225795231 FOXP1 JASPAR yes 35754752
chr1 225795216 225795237 IRF1 JASPAR yes 35754753
chr1 225795217 225795232 FOXP1 JASPAR yes 35754754
chr1 225795217 225795238 IRF1 JASPAR yes 35754755
Genes associated with rs534943449[chr1:225795217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More