EnhancerDB
  1. Home
  2. SNP
  3. rs534952880[chr5:14174921]
Enhancers that have rs534952880[chr5:14174921]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14142745 14193315 enh22052
Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534952880[chr5:14174921]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14174909 14174923 IRF7 JASPAR yes 61019128
chr5 14174914 14174931 BCL6B JASPAR yes 61019130
chr5 14174921 14174927 ZNF354C JASPAR yes 61019131
Genes associated with rs534952880[chr5:14174921], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More