EnhancerDB
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  3. rs534971809[chr1:8719620]
Enhancers that have rs534971809[chr1:8719620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8718005 8741275 enh11473
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534971809[chr1:8719620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8719609 8719624 MEF2C JASPAR yes 26582894
chr1 8719610 8719625 MEF2A JASPAR yes 26582895
chr1 8719611 8719623 MEF2A JASPAR yes 26582896
chr1 8719611 8719623 MEF2D JASPAR yes 26582897
chr1 8719616 8719631 FOXP1 JASPAR yes 26582898
chr1 8719619 8719625 TBP TRANSFAC yes 26582899
chr1 8719620 8719635 FOXP1 JASPAR yes 26582900
Genes associated with rs534971809[chr1:8719620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More