EnhancerDB
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  3. rs534985115[chr5:172277304]
Enhancers that have rs534985115[chr5:172277304]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534985115[chr5:172277304]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172277291 172277308 RXRA JASPAR yes 67834569
chr5 172277293 172277314 ZNF263 JASPAR yes 67834570
chr5 172277298 172277308 SP1 JASPAR yes 67834572
chr5 172277299 172277319 RREB1 JASPAR yes 67834573
chr5 172277301 172277307 NFE2 TRANSFAC yes 67834574
chr5 172277303 172277312 SP1 TRANSFAC yes 67834575
chr5 172277303 172277323 RREB1 JASPAR yes 67834576
chr5 172277304 172277324 RREB1 JASPAR yes 67834577
Genes associated with rs534985115[chr5:172277304], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More