EnhancerDB
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  3. rs535274656[chr12:125208137]
Enhancers that have rs535274656[chr12:125208137]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs535274656[chr12:125208137]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125208106 125208482 ZNF143 GTRD no Epithelial (MCF-7) 21582341
chr12 125208124 125208138 GATA2 JASPAR yes 124413668
chr12 125208132 125208147 ZIC3 JASPAR yes 124413671
chr12 125208132 125208147 ZIC4 JASPAR yes 124413672
chr12 125208133 125208147 GLIS2 JASPAR yes 124413673
chr12 125208133 125208147 ZIC1 JASPAR yes 124413674
chr12 125208137 125208147 ZNF740 JASPAR yes 124413675
Genes associated with rs535274656[chr12:125208137], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More