EnhancerDB
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  3. rs535417092[chr19:2613634]
Enhancers that have rs535417092[chr19:2613634]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs535417092[chr19:2613634]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2613628 2613638 SP1 JASPAR yes 112083169
chr19 2613628 2613642 GLIS2 JASPAR yes 112083170
chr19 2613628 2613642 GLIS3 JASPAR yes 112083171
chr19 2613628 2613642 ZIC1 JASPAR yes 112083172
chr19 2613630 2613635 SP1 TRANSFAC yes 112083173
chr19 2613631 2613636 SP1 TRANSFAC yes 112083174
chr19 2613631 2613637 SP1 TRANSFAC yes 112083175
Genes associated with rs535417092[chr19:2613634], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More