EnhancerDB
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  3. rs535435653[chr1:235151996]
Enhancers that have rs535435653[chr1:235151996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
chr1 235151923 235152024 vista5687
VISTA
Transcript factors that have rs535435653[chr1:235151996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235151667 235152108 TCF7L2 GTRD no Colon (HCT116) 107885635
chr1 235151667 235152108 TCF7L2 GTRD no Colon (HCT116) 107885636
chr1 235151980 235151999 PAX5 JASPAR yes 36342731
chr1 235151980 235151999 PAX5 JASPAR yes 118487386
chr1 235151985 235151999 PAX6 JASPAR yes 36342732
chr1 235151985 235151999 PAX6 JASPAR yes 118487387
chr1 235151993 235152008 FOXP1 JASPAR yes 36342733
chr1 235151993 235152008 FOXP1 JASPAR yes 118487388
chr1 235151994 235152009 FOXP1 JASPAR yes 36342734
chr1 235151994 235152009 FOXP1 JASPAR yes 118487389
chr1 235151995 235152001 TBP TRANSFAC yes 36342735
chr1 235151995 235152001 TBP TRANSFAC yes 118487390
chr1 235151995 235152010 FOXP1 JASPAR yes 36342736
chr1 235151995 235152010 FOXP1 JASPAR yes 118487391
chr1 235151995 235152016 IRF1 JASPAR yes 36342737
chr1 235151995 235152016 IRF1 JASPAR yes 118487392
chr1 235151996 235152011 FOXP1 JASPAR yes 36342738
chr1 235151996 235152011 FOXP1 JASPAR yes 118487393
chr1 235151996 235152017 IRF1 JASPAR yes 36342739
chr1 235151996 235152017 IRF1 JASPAR yes 118487394
Genes associated with rs535435653[chr1:235151996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More