EnhancerDB
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  3. rs535456949[chr6:30770587]
Enhancers that have rs535456949[chr6:30770587]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs535456949[chr6:30770587]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30770569 30770590 IRF1 JASPAR yes 101052266
chr6 30770573 30770587 IRF7 JASPAR yes 101052268
chr6 30770573 30770587 IRF8 JASPAR yes 101052269
chr6 30770573 30770588 IRF9 JASPAR yes 101052270
chr6 30770582 30770595 EOMES JASPAR yes 101052271
chr6 30770584 30770595 TBX20 JASPAR yes 101052272
chr6 30770585 30770595 TBX21 JASPAR yes 101052273
Genes associated with rs535456949[chr6:30770587], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More