EnhancerDB
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  3. rs535868189[chr16:4332712]
Enhancers that have rs535868189[chr16:4332712]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs535868189[chr16:4332712]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4331935 4333290 TCF7L2 GTRD no Colon (HCT116) 21686278
chr16 4331940 4333630 ZNF143 GTRD no Epithelial (MCF-7) 21686279
chr16 4331940 4333886 ZNF143 GTRD no Epithelial (MCF-7) 21686280
chr16 4332022 4333423 TCF7L2 GTRD no Colon (HCT116) 21686281
chr16 4332646 4333439 TCF7L2 GTRD no Colon (HCT116) 21686284
chr16 4332698 4332719 IRF1 JASPAR yes 9265859
chr16 4332699 4332720 IRF1 JASPAR yes 9265860
chr16 4332703 4332715 IRF1 JASPAR yes 9265861
chr16 4332703 4332717 IRF7 JASPAR yes 9265862
chr16 4332703 4332717 ONECUT3 JASPAR yes 9265863
chr16 4332704 4332725 IRF1 JASPAR yes 9265864
chr16 4332705 4332720 FOXP1 JASPAR yes 9265866
chr16 4332706 4332717 FOXP2 JASPAR yes 9265867
chr16 4332706 4332718 FOXC2 JASPAR yes 9265868
chr16 4332706 4332721 STAT2 JASPAR yes 9265869
chr16 4332707 4332722 FOXP1 JASPAR yes 9265870
chr16 4332709 4332724 FOXP1 JASPAR yes 9265871
chr16 4332710 4332725 FOXP1 JASPAR yes 9265872
chr16 4332711 4332726 FOXP1 JASPAR yes 9265873
chr16 4332712 4332727 FOXP1 JASPAR yes 9265874
Genes associated with rs535868189[chr16:4332712], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More