EnhancerDB
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  3. rs535876097[chr1:235144187]
Enhancers that have rs535876097[chr1:235144187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs535876097[chr1:235144187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235143527 235144255 ZNF274 GTRD no Cervix (HeLa-S3) 21402933
chr1 235143918 235144210 ZNF274 GTRD no Blood (GM12878) 21402938
chr1 235144173 235144187 TCF7L2 JASPAR yes 36341592
chr1 235144184 235144198 FOXF2 JASPAR yes 36341594
chr1 235144184 235144199 FOXP1 JASPAR yes 36341595
chr1 235144185 235144196 FOXA1 JASPAR yes 36341596
chr1 235144185 235144196 FOXH1 JASPAR yes 36341597
chr1 235144185 235144200 FOXA1 JASPAR yes 36341598
chr1 235144186 235144197 FOXC1 JASPAR yes 36341599
chr1 235144186 235144198 FOXC2 JASPAR yes 36341600
chr1 235144187 235144198 FOXP2 JASPAR yes 36341601
Genes associated with rs535876097[chr1:235144187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More