EnhancerDB
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  3. rs535880896[chr1:225795211]
Enhancers that have rs535880896[chr1:225795211]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs535880896[chr1:225795211]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225795204 225795218 GLIS3 JASPAR yes 35754748
chr1 225795207 225795212 SP1 TRANSFAC yes 35754749
Genes associated with rs535880896[chr1:225795211], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More