EnhancerDB
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  3. rs535907853[chr1:171189256]
Enhancers that have rs535907853[chr1:171189256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171184889 171197675 enh12365
Skin (Keratinocyte) Ovary Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Heart
chr1 171189238 171189444 vista3860
VISTA
Transcript factors that have rs535907853[chr1:171189256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171188053 171189459 ZBTB33 GTRD no Lung (A549) 107845265
chr1 171188137 171189467 ZBTB33 GTRD no Lung (A549) 107845266
chr1 171188287 171189278 ZNF274 GTRD no Cervix (HeLa-S3) 107845267
chr1 171188335 171189299 ZNF274 GTRD no Bone Marrow (K562) 107845268
chr1 171188401 171189542 ZNF274 GTRD no Bone Marrow (K562) 107845269
chr1 171188422 171189294 ZNF143 GTRD no Epithelial (MCF-7) 107845270
chr1 171188447 171189290 ZNF143 GTRD no Epithelial (MCF-7) 107845271
chr1 171188481 171189271 ZBTB33 GTRD no Lung (A549) 107845273
chr1 171189145 171189515 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845274
chr1 171189176 171189512 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107845275
chr1 171189199 171189523 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107845276
chr1 171189227 171189477 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107845277
chr1 171189235 171189256 IRF1 JASPAR yes 33067980
chr1 171189235 171189256 IRF1 JASPAR yes 118397514
chr1 171189236 171189257 IRF1 JASPAR yes 33067982
chr1 171189236 171189257 IRF1 JASPAR yes 118397516
chr1 171189237 171189258 IRF1 JASPAR yes 33067984
chr1 171189237 171189258 IRF1 JASPAR yes 118397518
chr1 171189238 171189259 IRF1 JASPAR yes 33067986
chr1 171189238 171189259 IRF1 JASPAR yes 118397520
chr1 171189239 171189260 IRF1 JASPAR yes 33067988
chr1 171189239 171189260 IRF1 JASPAR yes 118397522
chr1 171189240 171189261 IRF1 JASPAR yes 33067990
chr1 171189240 171189261 IRF1 JASPAR yes 118397524
chr1 171189241 171189256 FOXP1 JASPAR yes 33067991
chr1 171189241 171189256 FOXP1 JASPAR yes 118397525
chr1 171189241 171189262 IRF1 JASPAR yes 33067992
chr1 171189241 171189262 IRF1 JASPAR yes 118397526
chr1 171189242 171189257 FOXP1 JASPAR yes 33067993
chr1 171189242 171189257 FOXP1 JASPAR yes 118397527
chr1 171189244 171189259 FOXP1 JASPAR yes 33067994
chr1 171189244 171189259 FOXP1 JASPAR yes 118397528
chr1 171189245 171189260 STAT2 JASPAR yes 33067995
chr1 171189245 171189260 STAT2 JASPAR yes 118397529
chr1 171189246 171189261 FOXP1 JASPAR yes 33067996
chr1 171189246 171189261 FOXP1 JASPAR yes 118397530
chr1 171189247 171189268 IRF1 JASPAR yes 33067997
chr1 171189247 171189268 IRF1 JASPAR yes 118397531
chr1 171189249 171189260 FOXP2 JASPAR yes 33067998
chr1 171189249 171189260 FOXP2 JASPAR yes 118397532
chr1 171189249 171189270 IRF1 JASPAR yes 33067999
chr1 171189249 171189270 IRF1 JASPAR yes 118397533
Genes associated with rs535907853[chr1:171189256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More