EnhancerDB
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  3. rs535919054[chr1:223889439]
Enhancers that have rs535919054[chr1:223889439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs535919054[chr1:223889439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223889433 223889443 ID4 JASPAR yes 35669435
chr1 223889433 223889443 TCF4 JASPAR yes 35669436
chr1 223889436 223889454 RARA JASPAR yes 35669437
Genes associated with rs535919054[chr1:223889439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More