EnhancerDB
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Chromosome characteristics of RARA[chr1:223889436-223889454]
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Enhancers possibly regulated by RARA[chr1:223889436-223889454]
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Chrom Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
SNP sites on RARA[chr1:223889436-223889454]
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Chrom Position dbSNP ID Reference Allele Alternative Allele id More
chr1 223889439 rs535919054 G C 978026
chr1 223889448 rs2404355 T C 978027
Genes possibly regulated by RARA[chr1:223889436-223889454]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
chr1 223889295 223963720 + CAPN2 ENSG00000162909.13 223889295 0.77 1.0 141 1875
Expression level of Genes
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miRNAs possibly regulated by RARA[chr1:223889436-223889454]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End strand miRNA Name miRBase ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of miRNAs
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No results