EnhancerDB
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  3. rs535964029[chr2:70343227]
Enhancers that have rs535964029[chr2:70343227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 70317005 70376348 enh5639
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 70342945 70343256 vista31999
VISTA
Transcript factors that have rs535964029[chr2:70343227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 70342931 70343356 RELA UCSC Txn Factor no Conserved 108432934
chr2 70343216 70343229 SMAD2 JASPAR yes 22080462
chr2 70343216 70343229 SMAD2 JASPAR yes 74896567
chr2 70343219 70343227 MEIS3 JASPAR yes 22080463
chr2 70343219 70343227 MEIS3 JASPAR yes 74896568
chr2 70343222 70343232 SREBF1 JASPAR yes 22080465
chr2 70343222 70343232 SREBF2 JASPAR yes 22080466
chr2 70343222 70343232 SREBF1 JASPAR yes 74896570
chr2 70343222 70343232 SREBF2 JASPAR yes 74896571
Genes associated with rs535964029[chr2:70343227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More