EnhancerDB
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  3. rs536059988[chr3:124559523]
Enhancers that have rs536059988[chr3:124559523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs536059988[chr3:124559523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124559503 124559524 IRF1 JASPAR yes 5406461
chr3 124559508 124559523 FOXP1 JASPAR yes 5406464
chr3 124559509 124559524 FOXP1 JASPAR yes 5406465
chr3 124559510 124559525 FOXP1 JASPAR yes 5406466
chr3 124559511 124559526 FOXP1 JASPAR yes 5406467
chr3 124559513 124559528 MEF2C JASPAR yes 5406468
Genes associated with rs536059988[chr3:124559523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More