EnhancerDB
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  3. rs536062402[chr1:229366320]
Enhancers that have rs536062402[chr1:229366320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs536062402[chr1:229366320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229366033 229366487 ESR1 UCSC Txn Factor no Conserved 107878011
chr1 229366131 229366707 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878012
chr1 229366201 229366797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878013
chr1 229366209 229366749 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107878014
chr1 229366273 229366629 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390856
chr1 229366273 229366629 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878015
chr1 229366307 229366322 RUNX2 JASPAR yes 35977660
chr1 229366308 229366552 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878016
chr1 229366319 229366649 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390857
chr1 229366319 229366649 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878017
chr1 229366320 229366640 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107878018
Genes associated with rs536062402[chr1:229366320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More