EnhancerDB
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  3. rs536116241[chr15:42233779]
Enhancers that have rs536116241[chr15:42233779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs536116241[chr15:42233779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42233768 42233788 RREB1 JASPAR yes 23008155
chr15 42233774 42233795 IRF1 JASPAR yes 23008156
chr15 42233775 42233790 FOXP1 JASPAR yes 23008157
chr15 42233775 42233795 RREB1 JASPAR yes 23008158
chr15 42233775 42233796 IRF1 JASPAR yes 23008159
chr15 42233777 42233792 FOXP1 JASPAR yes 23008160
Genes associated with rs536116241[chr15:42233779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More