EnhancerDB
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  3. rs536142585[chr5:172271820]
Enhancers that have rs536142585[chr5:172271820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs536142585[chr5:172271820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172271804 172271825 REST JASPAR yes 67833753
chr5 172271805 172271824 REST JASPAR yes 67833754
chr5 172271816 172271820 H4TF2 TRANSFAC yes 67833755
Genes associated with rs536142585[chr5:172271820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More