EnhancerDB
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  3. rs536195689[chr13:113393256]
Enhancers that have rs536195689[chr13:113393256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr13 113393010 113393289 vista17119
VISTA
Transcript factors that have rs536195689[chr13:113393256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113392878 113394948 ZNF274 GTRD no Cervix (HeLa-S3) 21605781
chr13 113392878 113394948 ZNF274 GTRD no Cervix (HeLa-S3) 108090521
chr13 113392949 113394571 TCF7L2 GTRD no Colon (HCT116) 21605782
chr13 113392949 113394571 TCF7L2 GTRD no Colon (HCT116) 108090522
chr13 113393046 113394829 ZNF143 GTRD no Epithelial (MCF-7) 21605783
chr13 113393046 113394829 ZNF143 GTRD no Epithelial (MCF-7) 108090523
chr13 113393151 113394737 ZNF274 GTRD no Blood (GM12878) 108090524
chr13 113393157 113393795 ZNF274 GTRD no Blood (GM12878) 108090525
chr13 113393172 113394625 TCF7L2 GTRD no Colon (HCT116) 21605784
chr13 113393172 113394625 TCF7L2 GTRD no Colon (HCT116) 108090526
chr13 113393173 113394462 ZNF274 GTRD no Liver (HepG2) 21605785
chr13 113393173 113394462 ZNF274 GTRD no Liver (HepG2) 108090527
chr13 113393175 113394445 ZNF143 GTRD no Epithelial (MCF-7) 21605786
chr13 113393175 113394445 ZNF274 GTRD no Bone Marrow (K562) 21605787
chr13 113393175 113394445 ZNF143 GTRD no Epithelial (MCF-7) 108090528
chr13 113393175 113394445 ZNF274 GTRD no Bone Marrow (K562) 108090529
chr13 113393177 113394475 ZNF143 GTRD no Epithelial (MCF-7) 21605788
chr13 113393177 113394475 ZNF143 GTRD no Epithelial (MCF-7) 108090530
chr13 113393193 113394427 ZNF274 GTRD no Bone Marrow (K562) 21605789
chr13 113393193 113394427 ZNF274 GTRD no Bone Marrow (K562) 108090531
chr13 113393206 113394500 ZNF143 GTRD no Epithelial (MCF-7) 21605790
chr13 113393206 113394500 ZNF143 GTRD no Epithelial (MCF-7) 108090532
chr13 113393223 113394418 ZNF143 GTRD no Epithelial (MCF-7) 21605791
chr13 113393223 113394418 ZNF143 GTRD no Epithelial (MCF-7) 108090533
chr13 113393227 113393642 TCF7L2 GTRD no Colon (HCT116) 21605792
chr13 113393227 113393642 TCF7L2 GTRD no Colon (HCT116) 108090534
chr13 113393236 113394568 ZNF274 GTRD no Blood (GM12878) 108090535
chr13 113393249 113393258 ZEB1 JASPAR yes 19346162
chr13 113393249 113393258 ZEB1 JASPAR yes 60432552
chr13 113393249 113393261 PKNOX2 JASPAR yes 19346163
chr13 113393249 113393261 PKNOX2 JASPAR yes 60432553
chr13 113393252 113393257 USF2 TRANSFAC yes 19346164
chr13 113393252 113393257 USF2 TRANSFAC yes 60432554
chr13 113393255 113393259 NFE TRANSFAC yes 19346165
chr13 113393255 113393259 NFE TRANSFAC yes 60432555
Genes associated with rs536195689[chr13:113393256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More