EnhancerDB
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  3. rs536441279[chr17:43254238]
Enhancers that have rs536441279[chr17:43254238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs536441279[chr17:43254238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43254223 43254244 IRF1 JASPAR yes 54433594
chr17 43254225 43254240 PRDM1 JASPAR yes 54433595
chr17 43254225 43254240 STAT2 JASPAR yes 54433596
chr17 43254229 43254250 IRF1 JASPAR yes 54433597
chr17 43254229 43254250 ZNF263 JASPAR yes 54433598
chr17 43254230 43254251 ZNF263 JASPAR yes 54433599
chr17 43254233 43254254 IRF1 JASPAR yes 54433600
chr17 43254233 43254254 ZNF263 JASPAR yes 54433601
chr17 43254237 43254258 IRF1 JASPAR yes 54433602
chr17 43254237 43254258 ZNF263 JASPAR yes 54433603
Genes associated with rs536441279[chr17:43254238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More