EnhancerDB
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  3. rs536456689[chr1:173392876]
Enhancers that have rs536456689[chr1:173392876]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs536456689[chr1:173392876]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173392569 173394047 ZNF274 GTRD no Bone Marrow (K562) 21351342
chr1 173392660 173394101 ZNF274 GTRD no Bone Marrow (K562) 21351343
chr1 173392710 173393863 ZNF274 GTRD no Cervix (HeLa-S3) 21351344
chr1 173392814 173393870 ZNF274 GTRD no Cervix (HeLa-S3) 21351345
chr1 173392826 173394129 ZBTB33 GTRD no Brain (SK-N-SH) 21351346
chr1 173392831 173394113 ZBTB33 GTRD no Brain (SK-N-SH) 21351347
chr1 173392842 173393895 ZNF274 GTRD no Bone Marrow (K562) 21351348
chr1 173392842 173394093 TCF7L2 GTRD no Colon (HCT116) 21351349
chr1 173392848 173393632 ZNF274 GTRD no Bone Marrow (K562) 21351350
chr1 173392850 173394121 ZBTB33 GTRD no Brain (SK-N-SH) 21351351
chr1 173392855 173393674 ZNF274 GTRD no Cervix (HeLa-S3) 21351352
chr1 173392873 173393731 ZNF274 GTRD no Cervix (HeLa-S3) 21351353
chr1 173392875 173394192 ZBTB33 GTRD no Brain (SK-N-SH) 21351354
chr1 173392876 173392880 NFE TRANSFAC yes 33198606
chr1 173392876 173392881 GATA1 TRANSFAC yes 33198607
chr1 173392876 173392882 GATA3 JASPAR yes 33198608
Genes associated with rs536456689[chr1:173392876], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More