EnhancerDB
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  3. rs536575507[chr1:19754397]
Enhancers that have rs536575507[chr1:19754397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs536575507[chr1:19754397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19754388 19754408 RREB1 JASPAR yes 27188821
chr1 19754393 19754413 RREB1 JASPAR yes 27188822
chr1 19754395 19754410 FOXA1 JASPAR yes 27188823
chr1 19754396 19754402 TCF4 TRANSFAC yes 27188824
chr1 19754396 19754408 FOXI1 JASPAR yes 27188825
chr1 19754396 19754411 FOXP1 JASPAR yes 27188826
chr1 19754397 19754409 FOXC2 JASPAR yes 27188827
Genes associated with rs536575507[chr1:19754397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More