EnhancerDB
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  3. rs536611577[chr5:171847598]
Enhancers that have rs536611577[chr5:171847598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171823725 171849015 enh22806
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs536611577[chr5:171847598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171847254 171847935 STAT3 UCSC Txn Factor no Conserved 108537454
chr5 171847504 171847885 NFYA UCSC Txn Factor no Conserved 108537455
chr5 171847530 171847893 NFYB UCSC Txn Factor no Conserved 108537456
chr5 171847538 171847935 GABPA UCSC Txn Factor no Conserved 108537457
chr5 171847541 171847897 CHD2 UCSC Txn Factor no Conserved 108537458
chr5 171847545 171847777 FOXA1 UCSC Txn Factor no Conserved 108537459
chr5 171847586 171847599 ELF1 JASPAR yes 67787975
chr5 171847589 171847607 NR3C1 JASPAR yes 67787976
chr5 171847590 171847598 FEV JASPAR yes 67787977
chr5 171847597 171847611 BATF3 JASPAR yes 67787978
Genes associated with rs536611577[chr5:171847598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More