EnhancerDB
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  3. rs536985109[chr1:43402620]
Enhancers that have rs536985109[chr1:43402620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43394865 43408895 enh296
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs536985109[chr1:43402620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43401578 43404928 POLR2A UCSC Txn Factor no Conserved 107803002
chr1 43401578 43404928 POLR2A UCSC Txn Factor no Conserved 107803003
chr1 43402608 43402620 PKNOX1 JASPAR yes 28468199
chr1 43402608 43402620 PKNOX2 JASPAR yes 28468200
chr1 43402608 43402620 TGIF1 JASPAR yes 28468201
chr1 43402608 43402620 TGIF2 JASPAR yes 28468202
chr1 43402615 43402621 NFIC JASPAR yes 28468204
chr1 43402617 43402621 H1TF2 TRANSFAC yes 28468205
chr1 43402617 43402621 NFE TRANSFAC yes 28468206
chr1 43402617 43402621 SRF TRANSFAC yes 28468207
Genes associated with rs536985109[chr1:43402620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More