EnhancerDB
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  3. rs537213257[chr6:88428988]
Enhancers that have rs537213257[chr6:88428988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr6 88428781 88429279 vista52700
VISTA
Transcript factors that have rs537213257[chr6:88428988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88428930 88429254 CEBPB UCSC Txn Factor no Conserved 108540921
chr6 88428973 88428989 RFX2 JASPAR yes 70397624
chr6 88428973 88428989 RFX3 JASPAR yes 70397625
chr6 88428973 88428989 RFX4 JASPAR yes 70397626
chr6 88428973 88428989 RFX5 JASPAR yes 70397627
chr6 88428973 88428989 RFX2 JASPAR yes 103324340
chr6 88428973 88428989 RFX3 JASPAR yes 103324341
chr6 88428973 88428989 RFX4 JASPAR yes 103324342
chr6 88428973 88428989 RFX5 JASPAR yes 103324343
Genes associated with rs537213257[chr6:88428988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More