EnhancerDB
  1. Home
  2. SNP
  3. rs537478686[chr2:232518944]
Enhancers that have rs537478686[chr2:232518944]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs537478686[chr2:232518944]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232518940 232518959 PAX5 JASPAR yes 81731973
chr2 232518942 232518946 LFA1 TRANSFAC yes 81731974
Genes associated with rs537478686[chr2:232518944], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More