EnhancerDB
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  3. rs537725762[chr17:56002479]
Enhancers that have rs537725762[chr17:56002479]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs537725762[chr17:56002479]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56002474 56002484 HOXA13 JASPAR yes 55000100
chr17 56002475 56002479 YY1 TRANSFAC yes 55000101
chr17 56002476 56002491 FOXP1 JASPAR yes 55000102
chr17 56002477 56002492 FOXP1 JASPAR yes 55000103
chr17 56002478 56002484 TBP TRANSFAC yes 55000104
chr17 56002478 56002493 FOXP1 JASPAR yes 55000105
chr17 56002478 56002499 IRF1 JASPAR yes 55000106
chr17 56002479 56002494 FOXP1 JASPAR yes 55000107
Genes associated with rs537725762[chr17:56002479], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More