EnhancerDB
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  3. rs538003189[chr2:102380391]
Enhancers that have rs538003189[chr2:102380391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 102380179 102380656 vista32519
VISTA
Transcript factors that have rs538003189[chr2:102380391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102380268 102380658 EP300 UCSC Txn Factor no Conserved 108433385
chr2 102380298 102380682 USF1 UCSC Txn Factor no Conserved 108433386
chr2 102380372 102380393 ZNF263 JASPAR yes 22102348
chr2 102380372 102380393 ZNF263 JASPAR yes 75836998
chr2 102380376 102380634 TEAD4 UCSC Txn Factor no Conserved 108433387
chr2 102380381 102380665 NFIC UCSC Txn Factor no Conserved 108433388
chr2 102380386 102380678 FOXA1 UCSC Txn Factor no Conserved 108433389
chr2 102380389 102380406 RARA JASPAR yes 22102350
chr2 102380389 102380406 RARA JASPAR yes 75837000
Genes associated with rs538003189[chr2:102380391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More