EnhancerDB
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  3. rs538023721[chr19:4373590]
Enhancers that have rs538023721[chr19:4373590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4365204 4379535 enh4970
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538023721[chr19:4373590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4372618 4375651 TCF7L2 GTRD no Colon (HCT116) 21840936
chr19 4372618 4375651 TCF7L2 GTRD no Colon (HCT116) 108371001
chr19 4372618 4375651 TCF7L2 GTRD no Colon (HCT116) 108371002
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 21840937
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 108371003
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 108371004
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 108371005
chr19 4373087 4377145 ZNF274 GTRD no Bone Marrow (K562) 21840938
chr19 4373087 4377145 ZNF274 GTRD no Bone Marrow (K562) 108371006
chr19 4373087 4377145 ZNF274 GTRD no Bone Marrow (K562) 108371007
chr19 4373087 4377145 ZNF274 GTRD no Bone Marrow (K562) 108371008
chr19 4373089 4376698 ZNF274 GTRD no Blood (GM12878) 21840939
chr19 4373089 4376698 ZNF274 GTRD no Blood (GM12878) 108371009
chr19 4373089 4376698 ZNF274 GTRD no Blood (GM12878) 108371010
chr19 4373089 4376698 ZNF274 GTRD no Blood (GM12878) 108371011
chr19 4373210 4374466 ZNF274 GTRD no Blood (GM12878) 21840940
chr19 4373210 4374466 ZNF274 GTRD no Blood (GM12878) 108371012
chr19 4373253 4377123 ZNF274 GTRD no Bone Marrow (K562) 21840941
chr19 4373253 4377123 ZNF274 GTRD no Bone Marrow (K562) 108371013
chr19 4373253 4377123 ZNF274 GTRD no Bone Marrow (K562) 108371014
chr19 4373253 4377123 ZNF274 GTRD no Bone Marrow (K562) 108371015
chr19 4373260 4377466 ZNF274 GTRD no Bone Marrow (K562) 21840942
chr19 4373260 4377466 ZNF274 GTRD no Bone Marrow (K562) 108371016
chr19 4373260 4377466 ZNF274 GTRD no Bone Marrow (K562) 108371017
chr19 4373260 4377466 ZNF274 GTRD no Bone Marrow (K562) 108371018
chr19 4373294 4374385 ZNF274 GTRD no Blood (GM12878) 21840943
chr19 4373294 4374385 ZNF274 GTRD no Blood (GM12878) 108371019
chr19 4373325 4376433 ZNF274 GTRD no Bone Marrow (K562) 21840944
chr19 4373325 4376433 ZNF274 GTRD no Bone Marrow (K562) 108371020
chr19 4373325 4376433 ZNF274 GTRD no Bone Marrow (K562) 108371021
chr19 4373325 4376433 ZNF274 GTRD no Bone Marrow (K562) 108371022
chr19 4373452 4376151 ZNF143 GTRD no Epithelial (MCF-7) 21840945
chr19 4373452 4376151 ZNF143 GTRD no Epithelial (MCF-7) 108371023
chr19 4373452 4376151 ZNF143 GTRD no Epithelial (MCF-7) 108371024
chr19 4373452 4376151 ZNF143 GTRD no Epithelial (MCF-7) 108371025
chr19 4373478 4375675 TCF7L2 GTRD no Colon (HCT116) 21840946
chr19 4373478 4375675 TCF7L2 GTRD no Colon (HCT116) 108371026
chr19 4373478 4375675 TCF7L2 GTRD no Colon (HCT116) 108371027
chr19 4373485 4376378 ZNF274 GTRD no Bone Marrow (K562) 21840947
chr19 4373485 4376378 ZNF274 GTRD no Bone Marrow (K562) 108371028
chr19 4373485 4376378 ZNF274 GTRD no Bone Marrow (K562) 108371029
chr19 4373485 4376378 ZNF274 GTRD no Bone Marrow (K562) 108371030
chr19 4373508 4374139 ZNF274 GTRD no Blood (GM12878) 21840948
chr19 4373508 4374139 ZNF274 GTRD no Blood (GM12878) 108371031
chr19 4373513 4377631 ZNF274 GTRD no Cervix (HeLa-S3) 21840949
chr19 4373513 4377631 ZNF274 GTRD no Cervix (HeLa-S3) 108371032
chr19 4373513 4377631 ZNF274 GTRD no Cervix (HeLa-S3) 108371033
chr19 4373513 4377631 ZNF274 GTRD no Cervix (HeLa-S3) 108371034
chr19 4373521 4375112 ZNF274 GTRD no Bone Marrow (K562) 21840950
chr19 4373521 4375112 ZNF274 GTRD no Bone Marrow (K562) 108371035
chr19 4373556 4376507 ZNF274 GTRD no Bone Marrow (K562) 21840951
chr19 4373556 4376507 ZNF274 GTRD no Bone Marrow (K562) 108371036
chr19 4373556 4376507 ZNF274 GTRD no Bone Marrow (K562) 108371037
chr19 4373556 4376507 ZNF274 GTRD no Bone Marrow (K562) 108371038
chr19 4373575 4373591 GLIS1 JASPAR yes 112169569
chr19 4373584 4376790 ZNF274 GTRD no Bone Marrow (K562) 21840952
chr19 4373584 4376790 ZNF274 GTRD no Bone Marrow (K562) 108371039
chr19 4373584 4376790 ZNF274 GTRD no Bone Marrow (K562) 108371040
chr19 4373584 4376790 ZNF274 GTRD no Bone Marrow (K562) 108371041
chr19 4373586 4373590 ESR1 TRANSFAC yes 112169571
chr19 4373586 4377752 ZNF274 GTRD no Blood (GM12878) 21840953
chr19 4373586 4377752 ZNF274 GTRD no Blood (GM12878) 108371042
chr19 4373586 4377752 ZNF274 GTRD no Blood (GM12878) 108371043
chr19 4373586 4377752 ZNF274 GTRD no Blood (GM12878) 108371044
chr19 4373587 4376334 ZNF274 GTRD no Cervix (HeLa-S3) 21840954
chr19 4373587 4376334 ZNF274 GTRD no Cervix (HeLa-S3) 108371045
chr19 4373587 4376334 ZNF274 GTRD no Cervix (HeLa-S3) 108371046
chr19 4373587 4376334 ZNF274 GTRD no Cervix (HeLa-S3) 108371047
Genes associated with rs538023721[chr19:4373590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More