EnhancerDB
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  3. rs538096506[chr12:125204520]
Enhancers that have rs538096506[chr12:125204520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538096506[chr12:125204520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125203671 125204675 AR GTRD no Prostate (PC-3) 21582307
chr12 125204474 125204678 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582310
chr12 125204517 125204534 RARA JASPAR yes 124413154
chr12 125204517 125204534 RXRA JASPAR yes 124413155
chr12 125204517 125204538 ZNF263 JASPAR yes 124413156
chr12 125204518 125204522 LFA1 TRANSFAC yes 124413157
Genes associated with rs538096506[chr12:125204520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More