EnhancerDB
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  3. rs538173225[chr6:42280462]
Enhancers that have rs538173225[chr6:42280462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42275585 42296471 enh9113
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs538173225[chr6:42280462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42280457 42280468 NFKB1 JASPAR yes 101707411
chr6 42280457 42280470 NFKB1 JASPAR yes 101707412
chr6 42280457 42280470 NFKB2 JASPAR yes 101707413
chr6 42280458 42280468 NFKB1 JASPAR yes 101707414
chr6 42280458 42280468 RELA JASPAR yes 101707415
chr6 42280458 42280469 NFKB1 JASPAR yes 101707416
Genes associated with rs538173225[chr6:42280462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More