EnhancerDB
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  3. rs538210275[chr5:172444843]
Enhancers that have rs538210275[chr5:172444843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172432905 172446573 enh22818
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs538210275[chr5:172444843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172444840 172444855 FOXP1 JASPAR yes 67848756
chr5 172444841 172444856 FOXP1 JASPAR yes 67848757
chr5 172444842 172444857 FOXP1 JASPAR yes 67848758
chr5 172444842 172444863 IRF1 JASPAR yes 67848759
chr5 172444843 172444858 FOXP1 JASPAR yes 67848760
chr5 172444843 172444864 IRF1 JASPAR yes 67848761
Genes associated with rs538210275[chr5:172444843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More