EnhancerDB
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  3. rs538241331[chr3:124553618]
Enhancers that have rs538241331[chr3:124553618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538241331[chr3:124553618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124553370 124554329 TCF7L2 UCSC Txn Factor no Conserved 108530137
chr3 124553501 124554206 EP300 UCSC Txn Factor no Conserved 108530138
chr3 124553526 124554190 FOSL2 UCSC Txn Factor no Conserved 108530139
chr3 124553532 124553808 ESR1 UCSC Txn Factor no Conserved 108530140
chr3 124553540 124553941 TEAD4 UCSC Txn Factor no Conserved 108530141
chr3 124553615 124553626 FOXA1 JASPAR yes 5405583
chr3 124553615 124553626 FOXA1 JASPAR yes 71043354
chr3 124553616 124553623 SPIB JASPAR yes 5405584
Genes associated with rs538241331[chr3:124553618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More