EnhancerDB
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  3. rs538343808[chr12:122588239]
Enhancers that have rs538343808[chr12:122588239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs538343808[chr12:122588239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122588235 122588256 IRF1 JASPAR yes 124266085
chr12 122588236 122588251 FOXP1 JASPAR yes 124266086
chr12 122588236 122588257 IRF1 JASPAR yes 124266087
chr12 122588239 122588243 YY1 TRANSFAC yes 124266088
Genes associated with rs538343808[chr12:122588239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More