EnhancerDB
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  3. rs538344423[chr16:89405788]
Enhancers that have rs538344423[chr16:89405788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538344423[chr16:89405788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89404964 89406765 TCF7L2 GTRD no Colon (HCT116) 21738277
chr16 89404964 89406765 TCF7L2 GTRD no Colon (HCT116) 108225738
chr16 89405111 89406360 ZNF274 GTRD no Bone Marrow (K562) 21738278
chr16 89405111 89406360 ZNF274 GTRD no Bone Marrow (K562) 108225739
chr16 89405111 89406467 ZNF274 GTRD no Bone Marrow (K562) 21738279
chr16 89405111 89406467 ZNF274 GTRD no Bone Marrow (K562) 108225740
chr16 89405326 89406829 ZNF274 GTRD no Liver (HepG2) 21738280
chr16 89405326 89406829 ZNF274 GTRD no Liver (HepG2) 108225741
chr16 89405557 89406418 ZNF274 GTRD no Bone Marrow (K562) 21738281
chr16 89405557 89406418 ZNF274 GTRD no Bone Marrow (K562) 108225742
chr16 89405599 89406778 ZNF274 GTRD no Blood (GM12878) 21738282
chr16 89405599 89406778 ZNF274 GTRD no Blood (GM12878) 108225743
chr16 89405768 89405788 RREB1 JASPAR yes 12333386
chr16 89405771 89405791 RREB1 JASPAR yes 12333387
chr16 89405772 89405792 RREB1 JASPAR yes 12333389
chr16 89405775 89405795 RREB1 JASPAR yes 12333390
chr16 89405776 89405788 FOXI1 JASPAR yes 12333391
chr16 89405777 89405792 FOXP1 JASPAR yes 12333392
chr16 89405780 89405792 FOXI1 JASPAR yes 12333393
chr16 89405782 89405803 IRF1 JASPAR yes 12333394
chr16 89405784 89405799 IRF9 JASPAR yes 12333395
chr16 89405786 89405792 SOX10 JASPAR yes 12333396
chr16 89405786 89405801 STAT2 JASPAR yes 12333397
Genes associated with rs538344423[chr16:89405788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More