EnhancerDB
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  3. rs538395535[chr2:232479411]
Enhancers that have rs538395535[chr2:232479411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs538395535[chr2:232479411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435689
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435690
chr2 232476928 232480423 POLR2A UCSC Txn Factor no Conserved 108435691
chr2 232479376 232479706 BHLHE40 UCSC Txn Factor no Conserved 108435701
chr2 232479408 232479426 RARA JASPAR yes 81726191
Genes associated with rs538395535[chr2:232479411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More