EnhancerDB
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  3. rs538419130[chr1:95080223]
Enhancers that have rs538419130[chr1:95080223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95053805 95129570 enh12075
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 95080073 95080238 vista2557
VISTA
Transcript factors that have rs538419130[chr1:95080223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95080206 95080227 IRF1 JASPAR yes 30894439
chr1 95080206 95080227 IRF1 JASPAR yes 118333176
chr1 95080208 95080223 PRDM1 JASPAR yes 30894440
chr1 95080208 95080223 STAT2 JASPAR yes 30894441
chr1 95080208 95080223 PRDM1 JASPAR yes 118333177
chr1 95080208 95080223 STAT2 JASPAR yes 118333178
chr1 95080209 95080223 STAT1 JASPAR yes 30894442
chr1 95080209 95080223 STAT1 JASPAR yes 118333179
Genes associated with rs538419130[chr1:95080223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More