EnhancerDB
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  3. rs538462172[chr1:113445322]
Enhancers that have rs538462172[chr1:113445322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113444365 113452393 enh12155
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs538462172[chr1:113445322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113445314 113445322 SP1 TRANSFAC yes 31600290
chr1 113445314 113445335 IRF1 JASPAR yes 31600291
chr1 113445316 113445337 IRF1 JASPAR yes 31600292
chr1 113445318 113445339 IRF1 JASPAR yes 31600293
chr1 113445319 113445334 FOXP1 JASPAR yes 31600294
chr1 113445321 113445336 FOXP1 JASPAR yes 31600295
chr1 113445322 113445337 FOXP1 JASPAR yes 31600296
Genes associated with rs538462172[chr1:113445322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More